Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Multidrug resistance protein B from Pseudomonas fluorescens FW300-N2E2

 Score =  138 bits (347), Expect = 4e-37
 Identities = 106/394 (26%), Positives = 194/394 (49%), Gaps = 15/394 (3%)

Query: 34  NFP--VWTVLIGTLFARTSFFMAWPFLVVFLYQDYHATATEVGAMLATSALVGSLTGLYS 91
           N+P  V  +L  +L    +  +  P+LV++L  ++     ++G ++ ++ ++GSL  LY 
Sbjct: 7   NYPASVNLLLSASLILTLARAITLPYLVIYLSGNFGLNVADIGLVIGSTLIIGSLLSLYG 66

Query: 92  GYLSDKFGRKWVMVSGTLIATFAYTGIGLSNQIWQFFIMIVLTGLMRPMIEAPGKAVIGD 151
           G+L D      +++  + + T  + G  L+  +W F+  +VL  L   +I+   KA  G 
Sbjct: 67  GFLVDNVSSYRLILVFSGLFTAGFLGTFLARDLWLFYSCLVLINLAYAVIDIAVKAGFGS 126

Query: 152 NLPDEKDRELALNVRYFLLNLGGAIGPLIGITLA---LAHPQVLFIVTG----IAYFLFG 204
            L    +R  A +++Y L N+G A+GP +G  +A   ++ P +L  + G    + YF++G
Sbjct: 127 LLA-VAERSEAFSIKYTLTNIGYAVGPFLGAGIADLDISLPFLLSCMLGAGFCLVYFVWG 185

Query: 205 LWLLATLERKG-RFQQPDRSLLP-NFSATLRVISKDNVFVKMMLANFLMMFVYGQVESSL 262
              LA ++    R +    S  P  F A  +++ +D   V   L   L   V+GQ  + L
Sbjct: 186 DRDLAVVDASHCRSELARESAKPVPFLAVGKLLLRDYRLVCFTLGGLLSAVVFGQFTAYL 245

Query: 263 PQVIVRSGIADAA-QLVAGLVLVNTMTIILFQFPTLKLLESVPLFTRTRLGMALMGLAQV 321
            Q +V +  A +  ++++ LV  N + +I  Q+   + +    L      G++L  L   
Sbjct: 246 SQYLVVTTTAQSTYRIISALVTTNALMVISLQYVIGRKISHRHLNLWLAAGLSLFILGLA 305

Query: 322 GFMFTPEAFPLGWYLACFVLSMGEVIAFPTLNVQIDRLAPAHLRGSYFGAAALYSLGFAI 381
           GF        L W +A  V ++GE+I FPT  + ID +AP HLRG Y+ A  L +LG A 
Sbjct: 306 GFAVADTL--LLWVIAMAVFTVGEIIVFPTEYMFIDNIAPDHLRGMYYAAQNLGNLGAAS 363

Query: 382 APLAGGMMIEYLNAQWLYGLCFVLCLAMMGLYYL 415
            P+  G+++      +++ +  +  +A    Y+L
Sbjct: 364 GPVLCGVVLATQPPHYIFYMLALFIVAGGVFYFL 397