Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., major facilitator transporter (RefSeq) from Shewanella loihica PV-4

 Score = 54.3 bits (129), Expect = 9e-12
 Identities = 83/359 (23%), Positives = 146/359 (40%), Gaps = 55/359 (15%)

Query: 72  EVGAMLATSALVGSLTGLYSGYLSDKFGRKWVMVSGTLIATFAYTGIGLSNQIWQFFIMI 131
           + G +++  AL+ +   +++G +SD+ G K  + + TLI    Y  +      W F    
Sbjct: 72  DYGVIISVWALMQTFIPVFTGGISDRVGYKETIFASTLIKISGYLVMAFFPNFWGFLFGA 131

Query: 132 VL----TGLMRPMIEAPGKAVIGDNLPDEKDRELALNVRYFLLNLGGAIGPLIGITLALA 187
           +L    TG+ +P I+  G  V+       ++  +A  + Y ++N+GG +GPL+ + +   
Sbjct: 132 ILLAGGTGIFKPGIQ--GTLVLSTG---RQNTSMAWGIFYQVVNIGGFLGPLVAVHMRQL 186

Query: 188 HPQVLFIVTGIAYFLFGLWLLATLERKGRFQQPDRS-LLPNFSATLRVISKD-------N 239
               +F        L  L+LLA  E  G+ ++ +R+  + +   T   + KD        
Sbjct: 187 SWDNVFYACAAIISLNFLFLLAYKE-PGKEERIERNRKIKSGEITQEALWKDALHELKKP 245

Query: 240 VFVKMMLANFLMMFVYGQVESSLP---------QVIVRS----------------GIADA 274
           V +  ML      F++  +   LP          VIV S                G+ ++
Sbjct: 246 VVIYYMLVFAGFWFLFNSLFDVLPIHIAEWVDTSVIVTSLFGSEGTSNGILQFWLGLDNS 305

Query: 275 AQLV--AGLVLVNTMTIILFQFPTLKLLESVPLFTRTRLGMALMGLAQVGFMFTPEAFPL 332
              V   G++ +N   I+   F    L     + T    G  L  +A V    T  A+ +
Sbjct: 306 GTKVMPEGMLNLNAGMIMTSCFLVAALTAKYRITTAMLAGCLLSIIAFVLIGATNAAWMI 365

Query: 333 GWYLACFVLSMGEVIAFPTLNVQIDRLAPAHLRGSYFGAAALYSLGFAIAPLAGGMMIE 391
              LA  + S GE++  P  N  +  +AP        G  A+Y LGF + P   G  +E
Sbjct: 366 --VLAIAMFSFGEMMISPKKNEFMGNIAPK-------GKKAMY-LGFVMLPQGIGWGLE 414