Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 88/431 (20%), Positives = 166/431 (38%), Gaps = 55/431 (12%)

Query: 15  EKGIESSESLFQWERVGRFNFPVWTVLIGTLFARTSFFMAWPFLVVFLYQDYHA-----T 69
           E  +   + L  W  +   ++  W V    L  R +++       ++      A     +
Sbjct: 9   ENDLREVKQLGMWASITSLSYIFWLVGGMELVERIAYYGVKASAGLYAKAPESAGGLGIS 68

Query: 70  ATEVGAMLATSALVGSLTGLYSGYLSDKFGRKWVMVSGTLIATFAYTGIGLSNQIWQF-- 127
            ++ G +++  A++ +   +++G +SD+ G K  +   T+I    Y  +      W F  
Sbjct: 69  LSDYGIIISLWAIMQTFVPVFTGGISDRVGYKETIFGSTIIKIMGYLTMAFFPTFWGFLS 128

Query: 128 --FIMIVLTGLMRPMIEAPGKAVIGDNLPDEKDRELALNVRYFLLNLGGAIGPLIGITL- 184
              ++ + TG+ +P I+  G  V+  N     +  +A  + Y ++N+GG +GPL+ + + 
Sbjct: 129 GSLLLAIGTGIFKPGIQ--GTLVLSTN---RNNTSMAWGIFYQVVNIGGFLGPLVAVHMR 183

Query: 185 ALAHPQVLFIVTGIAYFLFGLWLLAT----LERKGRFQQPDRSLLPNFSATLRVIS--KD 238
            L+   V +    I    F   L  T     ER  R QQ     +   +         K 
Sbjct: 184 QLSWDNVFYACAAIISLNFLFLLTYTEPGKAERLARNQQIKSGDIKQETLWRDAWHELKK 243

Query: 239 NVFVKMMLANFLMMFVYGQVESSLP---------QVIVRS----------------GIAD 273
            + +  ML      F++  +   LP          VIV S                G+ +
Sbjct: 244 PIVIYYMLVFSGFWFLFNSLFDVLPIHISEWVDTSVIVTSLFGSEGTSNGILQFWLGLNN 303

Query: 274 AAQLV--AGLVLVNTMTIILFQFPTLKLLESVPLFTRTRLGMALMGLAQVGFMFTPEAFP 331
               V   G++ +N   I+   F    L     + T   +G  L  LA   F+F   AF 
Sbjct: 304 EGTKVMPEGMLNLNAGLIMTSCFLVAALTAKYRITTVMLIGCLLSILA---FVFI-GAFH 359

Query: 332 LGWYL--ACFVLSMGEVIAFPTLNVQIDRLAPAHLRGSYFGAAAL-YSLGFAIAPLAGGM 388
             W++  A  + S+GE++  P  N  +  +AP   +  Y G   L   +G+ +    G  
Sbjct: 360 AAWFIVFAIAMFSIGEMMISPKKNEFMGNIAPEGKKAMYLGFVMLPQGIGWGLEGYFGPK 419

Query: 389 MIEYLNAQWLY 399
           + E   ++ L+
Sbjct: 420 LYEIYASKELF 430