Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1092 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  105 bits (261), Expect = 8e-27
 Identities = 68/180 (37%), Positives = 96/180 (53%), Gaps = 13/180 (7%)

Query: 193 IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
           I  LAY DPLT L NR       ++++   +  N   AL+FLD+D+FK INDS GH VGD
Sbjct: 657 IRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGD 716

Query: 253 QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLR-DLDNILNRICNL 311
            VLK    RL  ++R +D        ++AR  GDEFV+LL G+   R D+   +  + N 
Sbjct: 717 TVLKIITARLEASVRLED--------TVARLGGDEFVVLLSGLEGSRSDVSKQVQTLANT 768

Query: 312 FVDRYPETDMLN----NLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYYH 367
             +   E   L+     +T SIG A+ P    T  +L + AD A+Y AK  G+N  + +H
Sbjct: 769 LRELLSEPMFLDGQRLQVTPSIGIALIPDHGSTPTDLLKRADIALYRAKDSGRNTSQMFH 828