Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  103 bits (258), Expect = 1e-26
 Identities = 65/183 (35%), Positives = 97/183 (53%), Gaps = 15/183 (8%)

Query: 187 TLYQEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSY 246
           TL    + +LA  DPLTGL NR        + +   Q      AL+F+D+D FK +ND++
Sbjct: 252 TLANRELTQLALHDPLTGLPNRVLLADRIDQAMHRVQEQGGCFALMFIDLDGFKPVNDAF 311

Query: 247 GHDVGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILN 306
           GH +GD +L+  A RLR ++R++D        ++AR  GDEFVLL+     L + D+ L 
Sbjct: 312 GHHMGDLLLRDVALRLREDLRSQD--------TLARIGGDEFVLLV----QLAEPDDALR 359

Query: 307 ---RICNLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQY 363
              R   L    +   +    ++ S+G A+YP +  +  EL   AD AMY AK  GKN Y
Sbjct: 360 LAARQVGLIARTFRVAEHDLQISASVGIALYPGNGQSADELLMNADAAMYHAKGAGKNGY 419

Query: 364 RYY 366
            ++
Sbjct: 420 SFF 422