Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 707 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  101 bits (252), Expect = 6e-26
 Identities = 67/191 (35%), Positives = 98/191 (51%), Gaps = 22/191 (11%)

Query: 182 INYIHTLYQEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKR 241
           ++ +  L+Q+ +E  A  DPLTGL NR  F   A   L   +   +   L++LD+D FKR
Sbjct: 262 MSVVRHLHQQ-LEYQAVTDPLTGLLNRRGFYQTAENLLMRSERLESNWVLLYLDLDGFKR 320

Query: 242 INDSYGHDVGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDL 301
           +NDS GHD GD+VL+  + +L+  +R  D         +AR  GDEF  LL       DL
Sbjct: 321 VNDSLGHDAGDRVLRWVSEQLKACLRPFD--------ILARLGGDEFTALL-------DL 365

Query: 302 D--NILNRICNLFVDRYPETDMLNNLTVSIGAAI----YPKDAITLPELTRCADKAMYAA 355
           +      +I    ++R      +  + V++GA+I    YP     L  L R +D AMY A
Sbjct: 366 EFPEQAAKIAEKLIERVAICQQIEGMDVALGASIGIATYPDCGANLDGLLRASDIAMYEA 425

Query: 356 KHGGKNQYRYY 366
           K  G+ QYR+Y
Sbjct: 426 KRAGRQQYRFY 436