Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  115 bits (289), Expect = 3e-30
 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 8/178 (4%)

Query: 189 YQEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGH 248
           Y E +E LAY D LT L NR  F    ++ + E    +   A++FLD+D FK++ND+ GH
Sbjct: 349 YAENVEYLAYHDGLTALPNRSLFSKLLSQSIGEASRYHRQLAVLFLDLDRFKQVNDTLGH 408

Query: 249 DVGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRI 308
           D GDQ+LK  A RL+  +R  D        ++AR  GDEFV+LL  + + +D+     ++
Sbjct: 409 DAGDQLLKEVALRLKACLRTSD--------TVARLGGDEFVILLPELSDDKDVATAAQKV 460

Query: 309 CNLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
                  +        +T S+G +++P+D +    L + AD AMY AK  GKN +++Y
Sbjct: 461 LGAIARPFNLQGQEFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQCGKNNFQFY 518