Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  103 bits (258), Expect = 1e-26
 Identities = 62/174 (35%), Positives = 86/174 (49%), Gaps = 8/174 (4%)

Query: 193 IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
           +E  A  D LTGL NR  F       L     +    A++++D+D FKRINDS GHD GD
Sbjct: 272 LETQAVTDSLTGLLNRRGFHQALESSLARVDRNGKRMAILYIDLDGFKRINDSLGHDAGD 331

Query: 253 QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLF 312
           ++L   A  L   +R  D         IAR  GDEF  LL  + +  D   +  ++  L 
Sbjct: 332 EILCKVARLLETCMRPYD--------IIARMGGDEFTALLDSLDHPEDAARVAEKLIELI 383

Query: 313 VDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
             R+        L  SIG A +P   +++ +L R AD AMY AK  G+ QYR++
Sbjct: 384 SVRHKVDGTEVTLGASIGIAHFPDCGVSVDQLLRSADMAMYEAKRAGRRQYRFF 437