Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  100 bits (249), Expect = 8e-26
 Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 8/170 (4%)

Query: 193 IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
           +  +A  D LTGL NR  F    +  L   + +    AL+++D+D FK+IND+YGH  GD
Sbjct: 280 LHRMAQYDELTGLPNRACFRDRLSTALARVRRNGGRIALLYVDLDRFKQINDTYGHGGGD 339

Query: 253 QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLF 312
           Q+L+  A RL   +R+ D        ++AR  GDEFV+LL  +    D   ++ ++ + F
Sbjct: 340 QLLRAVADRLTACVRDTD--------TVARLGGDEFVVLLESIAEPEDAQRVVEKVRSAF 391

Query: 313 VDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQ 362
                 T     + +SIG A+YP+D  T  +L + AD  MY  K  G  Q
Sbjct: 392 EQPLSITGHSLEIGMSIGIALYPEDGETETQLLKQADDRMYLMKARGGQQ 441