Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 705 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Xanthomonas campestris pv. campestris strain 8004

 Score =  103 bits (256), Expect = 2e-26
 Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 12/182 (6%)

Query: 193 IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
           +  +AY D LTGL NR  F       L   +S+++  AL+F DID+FKR+ND+ GH+ GD
Sbjct: 273 VRHMAYTDALTGLTNRLGFREGLDHLLHTARSTDSKLALLFADIDDFKRVNDTLGHEAGD 332

Query: 253 QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLF 312
           + L  F+ R+   +     A    D  +ARF GDEFV+LL       D+  +  ++ +  
Sbjct: 333 EALLQFSSRISRAV----AALGGDDAILARFGGDEFVILLQS----GDVTLLAAQLADRL 384

Query: 313 VDRYPETDMLNN----LTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYYHD 368
           V        +      L  SIG  ++P DA     L +  D AMY AK  GKN +R+Y  
Sbjct: 385 VHELSRPLNVQGREVFLGTSIGITLFPDDANDATALLKNGDIAMYQAKVAGKNCHRFYSR 444

Query: 369 AA 370
           AA
Sbjct: 445 AA 446