Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 828 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  119 bits (297), Expect = 4e-31
 Identities = 66/177 (37%), Positives = 99/177 (55%), Gaps = 8/177 (4%)

Query: 190 QEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHD 249
           Q  ++  A+ DPLTGL NR  FE+     L   + S ++ A++FLD+D FK INDS GH 
Sbjct: 381 QARLDYQAHHDPLTGLPNRILFESRLQAALLHSEESGSLGAVLFLDLDRFKHINDSLGHP 440

Query: 250 VGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRIC 309
           VGD +LK  AHRL+  +R+ D        ++AR  GDEF++LL G+    D   I N++ 
Sbjct: 441 VGDLLLKGIAHRLKETLRDID--------TVARLGGDEFIVLLPGLLQTSDAQAIANKLL 492

Query: 310 NLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
             F   +   +    ++ SIG+ ++P D   +  L + AD AMY +K  G+N+   Y
Sbjct: 493 ACFSTPFEAGEHELYISPSIGSCVFPTDGTDVATLVKNADAAMYRSKAKGRNRVESY 549