Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 763 a.a., diguanylate cyclase/phosphodiesterase from Pseudomonas syringae pv. syringae B728a

 Score =  122 bits (305), Expect = 5e-32
 Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 48/356 (13%)

Query: 29  VLISSGVATAIFLGF------ALYYYFNHQPLSSGLLLLSGIVTLLNMISLNRHRELHTQ 82
           V++  G++   +LG       A  YY   +P    L +L  +++ + +++L RH   +  
Sbjct: 131 VVMGVGISVMHYLGMSAMRSTATQYY---EPRMFALSILVAVLSSIALLTLPRHLRQYNG 187

Query: 83  ADLILSLILLTYALALVSNAQHELSHLLWLYPLITTL---------VMINPFRLGLVYSA 133
               +   +  YA++L+  A     HL+ +  L   +            N  +LGL  +A
Sbjct: 188 ----MFHQMFRYAVSLLLGAGLLTMHLMGMKALRLVIPEGTELHGPATENSQQLGLTIAA 243

Query: 134 AICLAMTASILFNPAQTGSYPIAQTYFLVSLFTLTIICNTASFFFSKAINYIHTLYQEGI 193
              L +  SI  + A        + + L  +  L    + A               +  +
Sbjct: 244 IALLIIAGSI--SAAMADKKLQGKEHDLQRVNALLTQLDQA---------------RVSL 286

Query: 194 EELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGDQ 253
           +++A+ DPLT L NR  F     EKL+E   +N + A++FLDID+FKRINDS GHD GD+
Sbjct: 287 QQVAHYDPLTNLINRRGFNQIFAEKLQEHTYNNGMLAVMFLDIDHFKRINDSLGHDAGDE 346

Query: 254 VLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLFV 313
           +LK  A R+R   R +D         +ARF GDEF +LL  + +  +  ++ +R+     
Sbjct: 347 LLKVIADRIRGATRVQD--------VVARFGGDEFCILL-SIPDYEEARHLAHRVMQKMK 397

Query: 314 DRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYYHDA 369
           +          +T SIG A++P+D  T  EL + AD A+Y +K  G+N   +++ A
Sbjct: 398 ETIALAGRRMVMTTSIGIAVFPRDGSTCDELLKHADLALYQSKDKGRNGVNFFNPA 453