Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 730 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  113 bits (283), Expect = 2e-29
 Identities = 73/188 (38%), Positives = 106/188 (56%), Gaps = 23/188 (12%)

Query: 190 QEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHD 249
           Q  I+ LAY DPLTGL NR       ++++   Q  N   AL+FLD+D+FK INDS GH 
Sbjct: 280 QAQIQHLAYHDPLTGLPNRALLLDRLSQQVSLLQHQNLRGALLFLDLDHFKHINDSLGHP 339

Query: 250 VGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGV--------RNLRDL 301
           VGD VL   A RL  ++R +D        ++AR  GDEFV+L+ G+        R +R+L
Sbjct: 340 VGDSVLSIIAARLEASVRQED--------TVARLGGDEFVVLICGLEGSQDEVTRQVREL 391

Query: 302 -DNILNRICN-LFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGG 359
            DN+ N +   +F+D +        +T SIG  + P D +T  +L + AD A+Y AK  G
Sbjct: 392 ADNLRNLLAEPMFLDGH-----RLQVTPSIGVVLIPDDGLTPADLLKRADIALYRAKDCG 446

Query: 360 KNQYRYYH 367
           +N  +++H
Sbjct: 447 RNASQFFH 454