Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  103 bits (258), Expect = 1e-26
 Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 8/189 (4%)

Query: 190 QEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHD 249
           ++ + +LA+ D LT L NR       ++ L   +SS    AL+ +D+DNF+ INDS GH+
Sbjct: 205 EQELAQLAHYDALTELPNRLLLTDRISQALTSARSSRRGCALLVVDLDNFRNINDSLGHN 264

Query: 250 VGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRIC 309
           +GD+VLK  A RL         A      +++R  GDEF LL+    ++     +  ++ 
Sbjct: 265 IGDEVLKAAAERL--------NALADSGMTVSRLGGDEFALLVKNCTHMVHAAALAQQVI 316

Query: 310 NLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYYHDA 369
           N F   YP       +T SIG +++P DA+T  +L R AD A++ AK  G+  +  Y + 
Sbjct: 317 NAFKAPYPIAGHQLFVTASIGISLFPGDALTAEQLLRNADSALFKAKTDGREGFALYTEE 376

Query: 370 AFPPAVETV 378
               A + V
Sbjct: 377 LTAQAQQRV 385