Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 889 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  104 bits (260), Expect = 9e-27
 Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 9/177 (5%)

Query: 190 QEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHD 249
           ++ +E  A  D LTGLANR+  +    E L   + S  + A++F+D+D FK IND++GH+
Sbjct: 459 EKALERQACYDFLTGLANRFLLQEQGQELLLLAKRSQEMLAVIFIDLDRFKDINDNFGHE 518

Query: 250 VGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRIC 309
           VGD+VL   A R+R ++R  D         IAR +GDEFV++L    + +    +  ++ 
Sbjct: 519 VGDRVLVEVAQRIRQSVRQSD--------LIARLSGDEFVVILPNT-DAQGAATLAQKLQ 569

Query: 310 NLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
                     D    LT S+G +++P D   L  L + AD AMY+ K GG++ + ++
Sbjct: 570 QQITPPIAIGDRSIQLTTSLGISLFPVDGDDLEILIKKADTAMYSIKEGGRDAFSFF 626