Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  104 bits (259), Expect = 7e-27
 Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 14/192 (7%)

Query: 176 FFFSKAINYIHTLYQEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLD 235
           F  ++A+   H    E + ELA  D LT L NR+ FE      L + + +  + +++ LD
Sbjct: 123 FSMARALRRSH----EKLRELAEHDSLTRLVNRYGFELCLNRALSQVRRTGGMLSVILLD 178

Query: 236 IDNFKRINDSYGHDVGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGV 295
           +D+FK +ND+ GH +GD +L   A RL + +R  D         IAR  GDEFV L+   
Sbjct: 179 LDDFKGVNDTLGHQMGDVLLVEVATRLSSALREND--------LIARIGGDEFVALICD- 229

Query: 296 RNLRDLD-NILNRICNLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYA 354
           ++ R L  ++  R+ + F + +   D    +  S+G AIY + A T  +L +CAD AMY 
Sbjct: 230 QDTRFLPFDLAKRLLSTFEEPFQLGDSAVMMGASLGIAIYGECANTAYDLLKCADIAMYR 289

Query: 355 AKHGGKNQYRYY 366
           AK  G+NQ ++Y
Sbjct: 290 AKEEGRNQIQFY 301