Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1036 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (261), Expect = 8e-27
 Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 8/174 (4%)

Query: 193 IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
           I + A  DPLT L NR     +   ++      N   AL+FLD+D FK +ND+ GHD+GD
Sbjct: 577 IWQQANYDPLTKLPNRRMLLDYLDREISLASRQNVRFALLFLDLDFFKEVNDTLGHDMGD 636

Query: 253 QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLF 312
           ++L   A R++  IR+ D         +AR  GDEF +L+  + ++  ++   + I    
Sbjct: 637 KLLIECADRIKACIRDSD--------VVARLGGDEFTVLIRDIHDVGGVERAASNILKAI 688

Query: 313 VDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
            + +        ++VSIG  ++P+DA T   L + AD+AMYAAK  G+N++ Y+
Sbjct: 689 AEPFQLGPDSAYISVSIGITLFPEDASTREALLKNADQAMYAAKEQGRNRFNYF 742