Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  105 bits (261), Expect = 7e-27
 Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 9/174 (5%)

Query: 194 EELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGDQ 253
           E LAY D LT L NR        + L        + A+ +LD+D+FK IND++GH VGD 
Sbjct: 473 EFLAYHDSLTNLPNRLLLADRMGQALALAVRRQDLLAVCYLDLDSFKPINDTWGHSVGDA 532

Query: 254 VLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLFV 313
           +L   A RL+ N R +D        ++AR  GDEFV+LL G +   +++ ++ R+ +   
Sbjct: 533 LLIEVARRLQQNARAED--------TVARLGGDEFVVLLCGFKAEAEVERVVRRMMDSIA 584

Query: 314 DRYPETDMLNNLTVSIGAAIYPKDAITLPE-LTRCADKAMYAAKHGGKNQYRYY 366
             Y        LTVS+G   +P+DA    + L R AD+AMY AK  G+N+  Y+
Sbjct: 585 TPYSVGGRQVTLTVSMGITTFPRDAEQEADALIRHADQAMYEAKRQGRNRIHYF 638