Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (283), Expect = 2e-29
 Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 8/170 (4%)

Query: 197 AYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGDQVLK 256
           A  DPLTGL NR     +   ++     +++  AL+FLD+D FK +ND+ GHD+GD +L+
Sbjct: 581 ANYDPLTGLPNRRMLLEYLNTEILRIDRNHSHFALMFLDLDFFKEVNDTLGHDMGDLLLQ 640

Query: 257 HFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLFVDRY 316
             A RL+  IR  D         +AR  GDEF ++L G+ +   ++ +   I     + Y
Sbjct: 641 ETAKRLKGCIRESD--------VVARLGGDEFTVVLSGIDSPSGVERVAQSILERIAEPY 692

Query: 317 PETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
              D    ++ SIG  IYP DA ++  L + AD+AMYAAK  G+N++ Y+
Sbjct: 693 SLGDETAYISASIGITIYPDDATSIEGLLKHADQAMYAAKEQGRNRFHYF 742