Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (249), Expect = 8e-26
 Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 8/178 (4%)

Query: 193 IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
           ++ +A  D LTGL +R +FE      +   Q +    A++F+D+D FK++NDS GHD GD
Sbjct: 264 LKYVAEHDDLTGLYSRSAFERQIDTAIARCQRTQMHAAMLFIDLDKFKQVNDSLGHDNGD 323

Query: 253 QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLF 312
           +VL   A R+++ +R+ D           R  GDEFV+ L  + ++ ++  ++++I    
Sbjct: 324 KVLSTAARRMQSAVRSSD--------ICGRLGGDEFVVWLEPINDIEEVTIVIDKIIRQI 375

Query: 313 VDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYYHDAA 370
                      +LTVSIG A+YP+D +T   L + AD  MY AK    N +R+    A
Sbjct: 376 SPPIVCGRTTVSLTVSIGVAMYPRDELTRLSLIKVADDNMYQAKQVKGNSHRFTEQVA 433