Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score =  109 bits (272), Expect = 2e-28
 Identities = 68/173 (39%), Positives = 94/173 (54%), Gaps = 10/173 (5%)

Query: 193 IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
           +E++A+ DPLTGL NR   E   +E ++E   S     L+F+D++ FK INDS GH VGD
Sbjct: 266 LEKMAHQDPLTGLPNRLQLELRLSEAIREASQSGGRLGLIFIDLNQFKAINDSLGHQVGD 325

Query: 253 QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLF 312
           +VL   A RL++   ++D         +AR  GDEFV+LL      R L+  + R+    
Sbjct: 326 RVLMTAATRLQSLKGSED--------LVARIGGDEFVMLLPQWPADRPLEEEVARLAEAL 377

Query: 313 VDRY--PETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQY 363
            +R+  P       +  SIG AIYP  A  +  L   AD+AMY AK  G NQY
Sbjct: 378 FERFAEPVIQTGRGIAASIGFAIYPDHAGHMDALLHVADQAMYIAKGRGDNQY 430