Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1491 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  108 bits (270), Expect = 1e-27
 Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 8/174 (4%)

Query: 193  IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
            +  LA  D LTGL NR  F     + ++  + +    AL+FLD+D FK +NDSYGH +GD
Sbjct: 1053 LRRLANYDVLTGLPNRSLFSNRLMQSIQAAEQNGEKLALLFLDLDRFKHVNDSYGHSMGD 1112

Query: 253  QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLF 312
             +L   ++RL++ I +        ++ + RF GDEFV+LL  V+ L D++++  ++    
Sbjct: 1113 ALLVEASNRLQSCIGS--------EHLLCRFGGDEFVILLKNVKELSDINHLAEQLLAQI 1164

Query: 313  VDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
            V  +        ++ SIG +I+P DA+      + AD AMY AK  G+  ++YY
Sbjct: 1165 VAPFRLFGREFYISTSIGISIWPDDAMQPEAFIKNADLAMYHAKEEGRGNFKYY 1218