Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  114 bits (286), Expect = 6e-30
 Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 8/180 (4%)

Query: 186 HTLYQEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDS 245
           H L +  +      DPLTGL NR   E      L           L+F+D+D FK +ND+
Sbjct: 428 HKLAEMDLTRRIVTDPLTGLFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDT 487

Query: 246 YGHDVGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNIL 305
           YGH VGD +L+  A RLR  +R+ D A         R  GDEF +LL+ V     ++ I 
Sbjct: 488 YGHAVGDTLLQQVAGRLRRRLRHTDIA--------IRLGGDEFAVLLWDVAGKEAVERIG 539

Query: 306 NRICNLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRY 365
             I ++    +  TD+  +++ SIGA++YP+ A   P L R AD+AMY AK  GKN+  +
Sbjct: 540 AGILSIMAPAFTCTDIPCSVSASIGASLYPQHADDAPSLLRLADEAMYRAKAEGKNRMAF 599