Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1505 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  126 bits (316), Expect = 5e-33
 Identities = 69/177 (38%), Positives = 98/177 (55%), Gaps = 8/177 (4%)

Query: 190  QEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHD 249
            +E +  LA  D LTGL NR  F+      + +   SN I AL+FLD+D FK INDS GH 
Sbjct: 1072 EEDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLDLDRFKHINDSMGHH 1131

Query: 250  VGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRIC 309
            +GD +LK  AHRL+N +R  D        ++AR  GDEF ++L GV   +    I  ++ 
Sbjct: 1132 IGDLLLKAVAHRLQNAVREGD--------TVARLGGDEFTIILEGVAKTKAATLISEKVL 1183

Query: 310  NLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
              F   +   D    ++ SIG ++YP DA  +  L + AD AMY AK  G+N +++Y
Sbjct: 1184 KAFQAPFLLDDKSLTISTSIGISLYPNDAEDVDSLIKFADTAMYHAKALGRNNFQFY 1240