Pairwise Alignments

Query, 396 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1487 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  112 bits (280), Expect = 7e-29
 Identities = 62/174 (35%), Positives = 97/174 (55%), Gaps = 8/174 (4%)

Query: 193  IEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGD 252
            +  LA  D LTGL NR  F +   + ++  Q +    AL+FLD+D FK +NDSYGH +GD
Sbjct: 1052 LRRLANYDVLTGLPNRSLFSSRLLQSIQTAQQTGEKLALLFLDLDRFKHVNDSYGHSMGD 1111

Query: 253  QVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLF 312
             +L   ++RL++ I +        ++ + RF GDEFV+LL    NL ++++I  R+    
Sbjct: 1112 ALLVEASNRLQSCIGS--------EHLLCRFGGDEFVILLRNANNLNEINHIAERLLAQI 1163

Query: 313  VDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYY 366
            V  +        ++ SIG +I+P DA+      + AD AMY AK  G+  ++YY
Sbjct: 1164 VAPFKLFGREFYISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGRGNFKYY 1217