Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Glycine cleavage system transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  105 bits (262), Expect = 1e-27
 Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 3/288 (1%)

Query: 6   PLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVLNSAG 65
           PL +L +F A A   S   AA  L+V+ +A+S  I+SLE  LG  LF R+ RQV L   G
Sbjct: 6   PLNALRAFEAAARLLSFKAAAAELSVTPTAVSHQIRSLENWLGLALFERLPRQVRLTDGG 65

Query: 66  KRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPDVDVR 125
           +R +  +  AL ++ ++ ++L     ++ +TL+   + A  W +PR   F A  P+++VR
Sbjct: 66  QRLFHSLHGALLEVAQSVDTLRPQRSTSHLTLSTTAAFAALWLVPRLGRFYARHPNINVR 125

Query: 126 ISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLKQALA 185
           + T      L +      ++      + + Y   L D+   +  S   ++  +  +Q   
Sbjct: 126 LDTHCEVIDLHQDASVDLVVRYSLDAYPNLYGMCLFDESFGVYGSPEQVA--LAARQVPT 183

Query: 186 QFPAIFVNNPRRQTDWDIWC-QANQVTPPPQQRNLSFSASAQALQATLSGLGVFVTHKLF 244
                + N+      WD WC QA +     Q    ++     ALQA ++G G+ +   + 
Sbjct: 184 LISVHWHNSKLYAHGWDAWCAQAGETWLTRQPCMRAYDEEHYALQAAIAGQGLVLASNIL 243

Query: 245 IKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNE 292
             + + SG+L      V     GY   C P   R   V     WL  E
Sbjct: 244 ASESIASGLLVGYRPDVQVNGAGYSALCVPGRERHPPVRAFFQWLGEE 291