Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

 Score =  131 bits (329), Expect = 2e-35
 Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 5/290 (1%)

Query: 3   KLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVLN 62
           ++  L  L +F + A   S T AA  LNV+ +AIS  I+ LE +LG  LF R+   + L 
Sbjct: 4   RIPSLNGLKAFESAARHMSFTKAAQELNVTQTAISHQIRRLEEELGVRLFLRLKDGLALT 63

Query: 63  SAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPDV 122
             G  Y+  V  A  ++   T++LL+   ++ +T++ + S A  W +PR +SFQ   P++
Sbjct: 64  DEGHAYFPGVRAAFHELRYCTQTLLQSRSNSVLTISTLVSFASKWLLPRLASFQQAFPNI 123

Query: 123 DVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK- 181
           DVR++  T   +  E GVD A+ +G   +W+    + L  DE+  V S  ++     L+ 
Sbjct: 124 DVRVTASTERVNFREGGVDAAIRYGS-GDWKGLRADWLMADEIFPVCSPRLLQGPKVLEN 182

Query: 182 -QALAQFPAIFVNNPRRQTDWDIWCQ-ANQVTPPPQQRNLSFSASAQALQATLSGLGVFV 239
            + LA+   + V+   R  DW  W   A Q     +   L+F  +  A+QA + GLGV +
Sbjct: 183 PRDLARHTLLQVSGVTRD-DWSAWLSAAGQPKKLAEGSRLTFDLAMMAVQAAVDGLGVCI 241

Query: 240 THKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWL 289
               +++ +L++G L          D G+YF    E   +  V   R+WL
Sbjct: 242 GRSTYVEDDLKAGRLVAPFDLRLKSDLGFYFVSPHETADTPKVQAFRTWL 291