Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 85/296 (28%), Positives = 130/296 (43%), Gaps = 17/296 (5%)

Query: 10  LYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVLNSAGKRYY 69
           L  F   A   S T  A+ L+V+  AISQ ++ LE +LG  LFHRVGR + L + G    
Sbjct: 13  LQVFACAARHLSFTRCAEELHVTPGAISQQMRQLEERLGFALFHRVGRGLELTAEG---- 68

Query: 70  QKVAPALEQIVEATESLLKPMHSNRI----TLNMINSLALHWWIPRFSSFQAFAPDVDVR 125
           Q++A    ++       L+ ++S RI     L  I S    W +PR    QA  PD+ +R
Sbjct: 69  QRLAVVANEVQSRISEELRLLYSGRIGGVFKLRCIPSFLSKWLMPRLPRLQAAFPDIQLR 128

Query: 126 ISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPL--KQA 183
           I     + SL +   D+A+       +       L ++EL  V S +++    PL     
Sbjct: 129 IIAEDSSGSLRDDDFDLAIDLND-GSYPGLSTTPLLEEELFAVCSPDLLVGKPPLDTPSQ 187

Query: 184 LAQFPAIFVNNPRR----QTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFV 239
           L  FP +      R      +W+ +  A        +R  +F+ +   + A   G+GV +
Sbjct: 188 LVHFPLLHDITAWRGSYEYAEWEFYLTAIGADGIDVRRGHTFNRNHLTIDAARMGMGVAI 247

Query: 240 THKLFIKQELESGIL-KEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNEFQ 294
             K  I  ELE G+L    G P+    + Y  A R  AL + +   +  WL NE Q
Sbjct: 248 ARKALITDELEQGLLIVPFGHPI-KARKKYVLAYREGALSTPSRRAVHDWLVNEAQ 302