Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  107 bits (266), Expect = 4e-28
 Identities = 80/292 (27%), Positives = 139/292 (47%), Gaps = 7/292 (2%)

Query: 2   RKLAPLKSLY-SFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVV 60
           R+L P  SL  +F A A  GS T AAD L ++ SA+S+ +++LE QL   LF R GR++ 
Sbjct: 4   RRLTPSMSLLLAFEAAARHGSFTKAADELALTQSAVSRQVQALEAQLEVELFKRDGRRIE 63

Query: 61  LNSAGKRYYQKVAPALEQIVEAT-ESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFA 119
           L +AG  Y  ++A AL +I  AT +++        + L ++ +    W +PR + F    
Sbjct: 64  LTTAGALYQHELAAALGRIRSATLQTIAHKAEGGTLHLAVLPTFGSKWLLPRMNDFYTRH 123

Query: 120 PDVDVRISTLTGAFSLEEQGVDV-ALIHGQWREWQDYYCEQLADDELVMVISQNMISANM 178
           P   V I +      L     ++ A+I      W  Y    L  ++LV++ S   ++   
Sbjct: 124 PGYVVHIHSRIVHADLTPAASEMNAIICAGNGNWPGYIAHPLVSEKLVVIASPAALAGYK 183

Query: 179 PLKQA-LAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGV 237
            +  A +AQ   + V +  R   W  W  +N++     +   SF  ++  +QA  +G+GV
Sbjct: 184 TMTPAQVAQHALLSVVS--RPNAWSDWFDSNRLDHHIMRPGPSFELTSHLIQAVAAGIGV 241

Query: 238 FVTHKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWL 289
            +  ++ ++ E+ SG L  + +P+    + YY A         ++   R WL
Sbjct: 242 ALVPRILVQDEIHSGELVTLFEPL-DSGRNYYLAYATRFQNLPSLCVFRDWL 292