Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  115 bits (287), Expect = 2e-30
 Identities = 79/297 (26%), Positives = 144/297 (48%), Gaps = 11/297 (3%)

Query: 1   MRKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVV 60
           MRKL PL++L  F A A     + AA+ L ++ SA+S  ++ LE  LGQ LF R GR++ 
Sbjct: 1   MRKLPPLRALQVFEAAARHLHFSRAAEELCLTQSAVSHQVRGLEQHLGQTLFARRGRELA 60

Query: 61  LNSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAP 120
           L   G++ +  V  AL+ + ++    L    S  + L + +S A+ W IPR   F+   P
Sbjct: 61  LTPKGEQLFLAVQSALDGL-DSLCRQLNEAESRELRLAVYSSFAVKWLIPRLGDFRRQHP 119

Query: 121 DVDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISA---- 176
            + + +  ++G   L +Q  D+ +   Q +  + ++   L  + L+ V S  + +A    
Sbjct: 120 GIKIHLEMVSGDPPLSDQVADMFICGEQHQ--RGFWQTLLRPERLIPVCSPALANALGEA 177

Query: 177 -NMPLKQALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGL 235
             MPL+  L   P + V+      DW  W + +Q     Q +  S+S    A++A ++G 
Sbjct: 178 LVMPLR--LDSLPLLSVDEADIGPDWARWAK-SQAQTLTQAQLQSYSHVLLAIEAAIAGQ 234

Query: 236 GVFVTHKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNE 292
           G+ +     ++ ++ +G L  +  P      G++F CR   L+  A+     W++ +
Sbjct: 235 GIALASDFIVEGDIAAGKLMALPWPALETGFGFHFCCRERRLKEPAMAAFAEWIQQQ 291