Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (268), Expect = 3e-28
 Identities = 78/296 (26%), Positives = 138/296 (46%), Gaps = 9/296 (3%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           R+L PL +L +F A A  G  T AA+ L V+ +A+S  +K LE  LG  LF R+ R + L
Sbjct: 3   RRLPPLNALRAFEAAARHGGFTRAAEELGVTPAAVSHQVKGLEDVLGLCLFRRLPRGLEL 62

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
              G+ Y   ++   +++  A E L +   + R+T++++ S   +W  PR   FQA  P+
Sbjct: 63  TEEGQAYLPDLSRGFDRLARAGERLREGGLAGRLTVSVLPSFCANWLAPRLPDFQAACPE 122

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMPLK 181
           V +R+ +          G+D+A+ +G+   +          +E+  V + ++++  +PL+
Sbjct: 123 VHLRMLSENRFADFNRDGIDMAIRYGR-GIYPGLRAIPFLAEEVFPVCAPSLLNGALPLR 181

Query: 182 QALAQFPAIFVNNPRRQTD------WDIWCQANQVTPPPQQRNLSFSASAQALQATLSGL 235
             LA      +     +T       W +W  A  +        + F+  +  +QA L+G+
Sbjct: 182 -GLADLRHHTLLRSIDETAGEPWLYWRLWLAAEGIEGVAPDGGIGFTDGSALVQACLAGV 240

Query: 236 GVFVTHKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEA-LRSEAVLTLRSWLR 290
           GV +     ++  L +G L      ++ P    YFA  P A L +  V     WLR
Sbjct: 241 GVALGRTALVEDHLRTGRLVRPFAGLSRPADFSYFAVAPAANLENPRVACFIDWLR 296