Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  109 bits (273), Expect = 7e-29
 Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 9/298 (3%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           R+L PL +L +F AVA   S+T AAD L+V+ +A+SQ I+ LE  LG  L  R GR + L
Sbjct: 13  RRLPPLTALRTFEAVARHLSVTNAADELSVTPAAVSQQIRQLEDTLGTALLRRHGRSLAL 72

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNR--ITLNMINSLALHWWIPRFSSFQAFA 119
             AG+     ++ A +++V+A    ++P    R  + + +  S A  W +PR   F    
Sbjct: 73  TDAGRALQPGLSEAFDRLVQAITE-MRPAADARPVVRVAVTPSFAEKWLVPRLGLFIRAN 131

Query: 120 PDVDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANMP 179
             +DV +           + VD+A+  G  R +     E L ++E+  V +  ++S   P
Sbjct: 132 EGIDVHVMAGMELMDFAREPVDLAVRFGAGR-YPGLTVELLREEEVFPVCAPALLSGAQP 190

Query: 180 LKQA--LAQFPAIFVNNPRRQ---TDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSG 234
           +++   L     I  +NP  +    DW +W  A      P      F+ S+  L+A   G
Sbjct: 191 IRKVVDLRHHVLIHDDNPAERDVCPDWTMWLTAAGFADLPAANGPRFNQSSMVLEAAAQG 250

Query: 235 LGVFVTHKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEALRSEAVLTLRSWLRNE 292
           LGV +      + +LESG L             Y+    P+AL    V   R WL  E
Sbjct: 251 LGVALAKGFLARADLESGRLARPFAENHALRFAYWVVSTPQALVRPEVRLFRDWLLGE 308