Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., putative glycine cleavage system transcriptional activator from Phaeobacter inhibens DSM 17395

 Score =  106 bits (264), Expect = 8e-28
 Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 6/295 (2%)

Query: 2   RKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVVL 61
           R L  + +L +  A+   GS + AAD L ++  A+S+ +++LE QLG  L  R  +++ L
Sbjct: 6   RFLPSIAALRALEALDRLGSASAAADELALTQGAVSRQLQALERQLGVDLVRRDQKRLTL 65

Query: 62  NSAGKRYYQKVAPALEQIVEATESLLKPMHSNRITLNMINSLALHWWIPRFSSFQAFAPD 121
           +   + Y   +  AL QI ++T  +     +  + L ++ +  + W +PR   F    PD
Sbjct: 66  SPEAQTYAADIRQALNQIAQSTLRVQAAPLAGSLNLAILPAFGMRWLMPRLPEFARLHPD 125

Query: 122 VDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISA-NMPL 180
           V + +ST    F+   +G D A IH    +W       L  ++++ V + +++    +  
Sbjct: 126 VTINMSTRLEPFNFVSEGFDAA-IHFGTADWPGTQALLLKHEQMLPVCAPDLLEGRQIST 184

Query: 181 KQALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGVFVT 240
              +A  P + +    R   W  W +++ +          +   A   QA L GLGV + 
Sbjct: 185 PVDIAALPLLHIQT--RPQAWQHWFESHDIALQDGLSGTMYDQFATITQAALHGLGVALM 242

Query: 241 HKLFIKQELESGILKEIGQPVTHPDQGYYFACRPEA-LRSEAVLTLRSWLRNEFQ 294
               ++Q+L +G L  +  P      G YF   PEA  +  A++  R+WL  + Q
Sbjct: 243 PDYLVEQDLATGRLIAL-HPTATESPGAYFLVWPEARAKDPALIKFRNWLAGQAQ 296