Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  111 bits (278), Expect = 2e-29
 Identities = 82/297 (27%), Positives = 140/297 (47%), Gaps = 12/297 (4%)

Query: 1   MRKLAPLKSLYSFVAVAETGSMTLAADALNVSHSAISQAIKSLELQLGQPLFHRVGRQVV 60
           MRK+ PL++L  F A A     + AA  L ++ SA+S  ++ LE     PLF R GR + 
Sbjct: 1   MRKIPPLRALQVFEAAARLQHFSRAAQELCITQSAVSHQVRLLEEHFALPLFRREGRSLR 60

Query: 61  LNSAGKRYYQKVAPALEQIVEATESLL--KPMHSNRITLNMINSLALHWWIPRFSSFQAF 118
           L   G++ +Q+ A    ++ E    LL  KP     + L + +S A+ W IPR S F+  
Sbjct: 61  LTDKGEQLFQETARIFNELGELNLRLLGEKP---EALRLAVYSSFAVKWLIPRLSGFRRL 117

Query: 119 APDVDVRISTLTGAFSLEEQGVDVALIHGQWREWQDYYCEQLADDELVMVISQNMISANM 178
            P + VR+  +T    L     D+  I GQ ++ + Y+ + L  + L+ V S  +IS++ 
Sbjct: 118 HPGIQVRLDMITEDPVLSHSSADM-FITGQ-QDQKGYWQQLLHAERLIPVCSPELISSSD 175

Query: 179 PLK-QALAQFPAIFVNNPRRQTDWDIWCQANQVTPPPQQRNLSFSASAQALQATLSGLGV 237
            L    L+    + V+      DW  W + ++V  P +++   FS    A++A ++G GV
Sbjct: 176 KLDLDWLSTQQLLTVDEGPLGLDWQRWFEHHRVAQPEEEQQQLFSHVLMAIEAAIAGQGV 235

Query: 238 FVTHKLFIKQELESGILKEIGQPVTHPDQG--YYFACRPEALRSEAVLTLRSWLRNE 292
            +     +  ++    L  +  P    D G  + F C+   L+  A+     WL  +
Sbjct: 236 ALASDFMVLDDIAKQRL--VALPFAGIDTGFEFNFLCKQRRLQEPAIAAFVHWLTQQ 290