Pairwise Alignments

Query, 402 a.a., DUF3541 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  265 bits (677), Expect = 2e-75
 Identities = 147/321 (45%), Positives = 193/321 (60%), Gaps = 3/321 (0%)

Query: 55  SPSVVAPVSFQATANLIKQTYESQLFTLPGFKEGHYALRMYRQTLDDKYAAAIGSDLSRV 114
           S    A +  Q     I+Q  E  L+ LP   +GHY +R+YR T DDKYA A   DL  V
Sbjct: 28  SAKTTASLDAQGVKQAIQQNLEDNLYQLPPRVQGHYGIRLYRMTGDDKYANAALVDLYAV 87

Query: 115 ASGLNYFAAEVNTPEQIQRYAQKRLKRYQHSDDERTQRRFAATQTMPEYLYLGIDLLGPM 174
                ++A +++ P  I++ AQ  +         R + R  A    PE+L+    LL   
Sbjct: 88  TESQAFYACQLDKPGFIEQEAQAAIDVL--GKGPRAKARKKALAPFPEFLFYTDVLLRFS 145

Query: 175 ARANEYGLQHKEDAKLRQVLRRYDFTPYATDRAMIEAWAAQLANQVYWLRQLGEQDVVEP 234
           +R +E+GLQ     KL + L+  D     TD+AMIEAWAAQL N VYW +QLG  D V+ 
Sbjct: 146 SRIDEFGLQGPCHDKLVKALKATDLKRGLTDKAMIEAWAAQLVNYVYWAKQLGVGDYVQE 205

Query: 235 FIQAFRDTYPDQRDCELNDQQYGNKLYGMTHIIFADSEYYQHPVSQQQHQWIYDYFRANI 294
           +   F   YP  RD +L+ +Q+ NK+YGMTH IFA SEYYQHPV + +  WI DYF ANI
Sbjct: 206 YKDGFNRVYPQSRDAKLDKKQFRNKIYGMTHFIFAASEYYQHPVDRAEFAWILDYFEANI 265

Query: 295 DTILLRAKPDIVAEVGIAFLLAGLEDDPVVLKTRQFIQAAVDKEQGMIPSTSGDFNLSLG 354
           D IL  A  DI+AEVGI+F LAG+ D+PVV KT+  I AA D +   IPS  G+ +L+LG
Sbjct: 266 DRILKDATDDIIAEVGISFHLAGMSDNPVVKKTQAHIMAAFDPKAQTIPSPRGNPDLALG 325

Query: 355 EHRNVLAIMLLDW-RSVNPAP 374
           EHRNVLA+MLLDW +S++  P
Sbjct: 326 EHRNVLAMMLLDWPKSLHQGP 346