Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1092 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  107 bits (268), Expect = 2e-27
 Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 6/159 (3%)

Query: 294 ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
           A HDPLT+LPNR   +  +       KR +  G  ALL +D+D FK INDS GH  GD V
Sbjct: 661 AYHDPLTNLPNRALLMDRLSQQIALLKRHNLRG--ALLFLDLDHFKHINDSLGHPVGDTV 718

Query: 354 LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIH-REQDVLK---VSDNILKRISETPIV 409
           L     R+++S+R+ D VAR+GGDEF+VL+  +     DV K      N L+ +   P+ 
Sbjct: 719 LKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSRSDVSKQVQTLANTLRELLSEPMF 778

Query: 410 YDDKLIHVRVSIGYALYDQSFATPDEMFKLADERMYTAK 448
            D + + V  SIG AL     +TP ++ K AD  +Y AK
Sbjct: 779 LDGQRLQVTPSIGIALIPDHGSTPTDLLKRADIALYRAK 817