Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  115 bits (288), Expect = 5e-30
 Identities = 78/216 (36%), Positives = 113/216 (52%), Gaps = 25/216 (11%)

Query: 255 QQLSWYTRNAV----RLLGYSVLLVLMAGFGVIMRLYQVAEER----------------- 293
           +QL+  TR A     R  G S+LLVL+AG    M  +Q+ + R                 
Sbjct: 298 EQLATVTRQAHTYLWRTAGGSLLLVLLAGLLARMS-WQLVQSRLRAGEAKIAYAENVEYL 356

Query: 294 ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
           A HD LT LPNR  F   +      A R H +   A+L +D+DRFK +ND+ GH AGD++
Sbjct: 357 AYHDGLTALPNRSLFSKLLSQSIGEASRYHRQ--LAVLFLDLDRFKQVNDTLGHDAGDQL 414

Query: 354 LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDK 413
           L   A R+K+ LR SD VAR+GGDEF++L+P +  ++DV   +  +L  I+  P     +
Sbjct: 415 LKEVALRLKACLRTSDTVARLGGDEFVILLPELSDDKDVATAAQKVLGAIAR-PFNLQGQ 473

Query: 414 LIHVRVSIGYALYDQSFATPDEMFKLADERMYTAKR 449
              V  S+G +++ Q       + K AD  MY AK+
Sbjct: 474 EFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQ 509