Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  114 bits (284), Expect = 1e-29
 Identities = 106/376 (28%), Positives = 169/376 (44%), Gaps = 35/376 (9%)

Query: 101 SLGIAPNDVVAFSYP-LPQTNALLGLDYRTVPQQWQSIKKAREIKQTFVSGPVDLVQGGR 159
           SL ++    V F YP L Q + + G+   TV    Q++ ++R+      S    L +GG 
Sbjct: 138 SLPLSETWPVLFMYPKLVQASTIYGVRLETVGHLSQALARSRQTTAPVASPVFALYEGGD 197

Query: 160 ALVIRE----PIFYDPPKDTRYWG---VLSVVMDWDSLLSATSIYSFGEHFQVAIRG-LD 211
           A ++ +    P    P     ++G   V  ++M  D+L +A  + +     Q+ I   LD
Sbjct: 198 AYILLQAVSRPETPHPSAGPNFFGSSMVALLLMRTDALRNA--VLATDRDGQLRIEAFLD 255

Query: 212 SR-GSEGDVFFGEPRVFEHAFAQENVYFPYGSWRIAVAEKQD---LLQQLSWYTRNAVRL 267
           S  G+   +F   P     A   + +  P  + R+ +        LL +   +  + +  
Sbjct: 256 SGVGASSSLFTTTPMP---AGMLDRLLLPRLTARVGIGSSSQPTTLLIERQLHLADVLTR 312

Query: 268 LGYSVLLVLMAGFGVIM--------------RLYQVAEERALHDPLTHLPNRRYFIYTIE 313
              ++LL+L+A  G++               R YQ +   A HD LT LPNR+       
Sbjct: 313 ETLAILLILVAALGLLPAVLVRHYRAIATAEREYQRSTYLATHDVLTRLPNRQLLTDRFA 372

Query: 314 HYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKVLVACAERIKSSLRVSDLVAR 373
             +   +R  +   FA++ +D+DRFK IND  GH  GD+VL+  AE+++  +R+ D  AR
Sbjct: 373 EAYAYLQRHGTP--FAVMVVDLDRFKDINDRFGHEVGDQVLIGVAEQMRQVIRMYDTAAR 430

Query: 374 IGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDKLIHVRVSIGYALYDQSFATP 433
            GGDEF+VL+  I    D       +L+ +S  PI  D     V  SIG AL        
Sbjct: 431 YGGDEFVVLVRDIASAADAEAAGHKLLQAVS-LPIATDAGEQRVSCSIGIALCPVDGENL 489

Query: 434 DEMFKLADERMYTAKR 449
           DE+   AD  MY  K+
Sbjct: 490 DELLTAADRAMYKVKQ 505