Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 886 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  108 bits (270), Expect = 7e-28
 Identities = 75/208 (36%), Positives = 109/208 (52%), Gaps = 14/208 (6%)

Query: 259 WYTRNAVRLLGYSVLLVLMAGFGVIMRLYQVAEER----ALHDPLTHLPNRRYFIYTIEH 314
           W T +AVR L   +   + A   +  R  + AEER    A +DPLT LPNRR  +  ++ 
Sbjct: 410 WLTISAVRNLTGDISHYVAAFTDITDR--KAAEERIHNLAFYDPLTGLPNRRLLLDRLQQ 467

Query: 315 YFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKVLVACAERIKSSLRVSDLVARI 374
                 RS   G  AL+ ID+D FK+IND HGH  GD+VL   AER++  +R SD VAR+
Sbjct: 468 AMAAGCRSGQLG--ALMFIDLDNFKNINDLHGHQTGDQVLRIAAERLQGEIRASDTVARL 525

Query: 375 GGDEFLVLIPRIHREQDVL-----KVSDNILKRISETPIVYDDKLIHVRVSIGYALYDQS 429
           GGDEF+V++  +    ++       +   +L  + + P   +D  ++   SIG  L+   
Sbjct: 526 GGDEFVVMLENLGDAPELAATQAEHIGMKLLGSLGK-PYRLNDLGLYSSASIGVVLFGTD 584

Query: 430 FATPDEMFKLADERMYTAKRRQNPLYRF 457
            ++ DE+ K AD  MY AK       RF
Sbjct: 585 GSSSDELMKRADMSMYEAKVAGKNALRF 612