Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 852 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  113 bits (282), Expect = 3e-29
 Identities = 61/153 (39%), Positives = 92/153 (60%), Gaps = 4/153 (2%)

Query: 296 HDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKVLV 355
           HDPLT LPNR      +E   +N     S     LL ID+DRFK +ND+ GH+AGD+VL+
Sbjct: 433 HDPLTGLPNRSRLRDYLE---QNLASLRSGSTMTLLYIDLDRFKPVNDTLGHAAGDEVLM 489

Query: 356 ACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDKLI 415
             A R++   R  DLVAR+GGDEF+V + R+  ++D+ ++ + I++ +S +P  Y++  I
Sbjct: 490 GVASRLRERTRDGDLVARLGGDEFVVALHRMSEDEDIDRLCNRIIEALS-SPFAYENHQI 548

Query: 416 HVRVSIGYALYDQSFATPDEMFKLADERMYTAK 448
            +  SIG AL        +E+ + AD  +Y AK
Sbjct: 549 SIGASIGVALAPMDATQANELLRCADIALYQAK 581