Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  114 bits (286), Expect = 5e-30
 Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 3/166 (1%)

Query: 285 RLYQVAEERALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDS 344
           +LY      A +D LT LPNR  F   +       +R+   G  ALL +D+DRFK IND+
Sbjct: 275 QLYARLHRMAQYDELTGLPNRACFRDRLSTALARVRRNG--GRIALLYVDLDRFKQINDT 332

Query: 345 HGHSAGDKVLVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRIS 404
           +GH  GD++L A A+R+ + +R +D VAR+GGDEF+VL+  I   +D  +V + + +   
Sbjct: 333 YGHGGGDQLLRAVADRLTACVRDTDTVARLGGDEFVVLLESIAEPEDAQRVVEKV-RSAF 391

Query: 405 ETPIVYDDKLIHVRVSIGYALYDQSFATPDEMFKLADERMYTAKRR 450
           E P+      + + +SIG ALY +   T  ++ K AD+RMY  K R
Sbjct: 392 EQPLSITGHSLEIGMSIGIALYPEDGETETQLLKQADDRMYLMKAR 437