Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 719 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  109 bits (272), Expect = 3e-28
 Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 3/185 (1%)

Query: 273 LLVLMAGFGVIMRLYQVAEERALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLN 332
           +++ +    V+  LYQ  E++A+ D LT L NRR     +E      +R+  +    +L 
Sbjct: 262 MVLTVLDMSVVRDLYQQLEKQAVTDALTGLLNRRGLYQAVESMLLRNERA--DKYLVVLF 319

Query: 333 IDIDRFKSINDSHGHSAGDKVLVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDV 392
           +D+D FK IND+ GH AGD+VL+  AE+ K S+R  D++ARIGGDEF V+I  +   +  
Sbjct: 320 MDLDGFKQINDTLGHEAGDQVLLWVAEQFKDSMRPYDVLARIGGDEFTVVIDGLDYPEQA 379

Query: 393 LKVSDNILKRISETPIVYDDKLIHVRVSIGYALYDQSFATPDEMFKLADERMYTAKRRQN 452
            K+++ +++R+S    V D   I +  S+G A +    +  D + + AD  MY AKR   
Sbjct: 380 AKIAEKLIERVSGRRQV-DGVEITLGASVGIATFPDCGSNLDGLLRAADIAMYEAKRAGR 438

Query: 453 PLYRF 457
             YRF
Sbjct: 439 QQYRF 443