Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., GGDEF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  298 bits (762), Expect = 3e-85
 Identities = 158/441 (35%), Positives = 253/441 (57%), Gaps = 8/441 (1%)

Query: 10  YVSIYFLALLFLGIAVIESLHISHTRDLQEGLRQQAKEDLSIVRFQLEAEILGDIYTVKG 69
           ++  + +   FL +  +E LH S+ RD     +Q   + L+++R  +EA++  DI     
Sbjct: 12  WIVAFAIVYWFLSLFTVEYLHRSYLRDYLAEQQQWFSQKLALIRANIEAKVNADILLADS 71

Query: 70  LTTLLTLDPDLNIYQWEPLSAAVIRNSDHLRSLGIAPNDVVAFSYPLPQTNALLGLDYRT 129
           L T+L+ +PD+   +W  L+  +    +++RS+ IAPNDVVA  YPL    +++GLD+R 
Sbjct: 72  LATILSFNPDVPYSKWTLLAGQLASKGEYIRSISIAPNDVVALVYPLAGNESVMGLDFRE 131

Query: 130 VPQQWQSIKKAREIKQTFVSGPVDLVQGGRALVIREPIFYDPPKDTRYWGVLSVVMDWDS 189
            P Q  ++ +AR  +Q  + GP+ L+QGG  L+ R P+F DPP +T+YWGV S+V+D D 
Sbjct: 132 TPAQMPAVLEARMSRQITLDGPITLIQGGIGLIARAPVFADPPTNTQYWGVCSIVIDLDR 191

Query: 190 LLSATSIYSFGEHFQVAIRGLDSRGSEGDVFFGEPRVFEHAFAQENVYFPYGSWRIAVAE 249
           L+++      GE   + IR L      G +F G+   F++A A   V+    +W IA+AE
Sbjct: 192 LINSIRDVDLGEGMTLGIRTLLYPDKRGPIFIGQSSDFDNARAVAQVHLLGATWEIALAE 251

Query: 250 KQDLLQQLSWYTRNAVRLLGYSVLLVLMAGFGVIMRLYQVAEERALHDPLTHLPNRRYFI 309
             +L    SW   N VRL+GY V L +   F ++   Y++A   +L D LT LPNRR+ +
Sbjct: 252 PAEL---RSWGATNVVRLIGYCVTLFIFLSFLMVSNAYRMARLVSLQDVLTGLPNRRFAM 308

Query: 310 YTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKVLVACAERIKSSLRVSD 369
             +     N       G F ++N+D++ FK +NDS GH+AGD +L A A+R++S LR SD
Sbjct: 309 SLL-----NKLIQAPNGRFTVINVDLNYFKQVNDSFGHAAGDAMLKAVAKRMQSVLRNSD 363

Query: 370 LVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDKLIHVRVSIGYALYDQS 429
           +VAR+GGDEFL+++PR+    D+  V   +     E P+   D  +++ +S+G A Y + 
Sbjct: 364 MVARLGGDEFLLILPRLTSPADISHVLMKVRHAACEQPLQMADITLNISISMGAARYPED 423

Query: 430 FATPDEMFKLADERMYTAKRR 450
                E+  +AD+ MY  K+R
Sbjct: 424 GQDITELLHVADKAMYEDKQR 444