Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 9e-30
 Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 3/159 (1%)

Query: 292 ERALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGD 351
           ++A +DPLT LPNRR  +  +        R+HS  +FAL+ +D+D FK +ND+ GH  GD
Sbjct: 579 KQANYDPLTGLPNRRMLLEYLNTEILRIDRNHS--HFALMFLDLDFFKEVNDTLGHDMGD 636

Query: 352 KVLVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYD 411
            +L   A+R+K  +R SD+VAR+GGDEF V++  I     V +V+ +IL+RI+E P    
Sbjct: 637 LLLQETAKRLKGCIRESDVVARLGGDEFTVVLSGIDSPSGVERVAQSILERIAE-PYSLG 695

Query: 412 DKLIHVRVSIGYALYDQSFATPDEMFKLADERMYTAKRR 450
           D+  ++  SIG  +Y     + + + K AD+ MY AK +
Sbjct: 696 DETAYISASIGITIYPDDATSIEGLLKHADQAMYAAKEQ 734