Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  264 bits (675), Expect = 4e-75
 Identities = 153/453 (33%), Positives = 257/453 (56%), Gaps = 12/453 (2%)

Query: 1   MGLTSHKYKYVSIY-FLALLFLGIAVIESLHISH---TRDLQEGLRQQAKEDLSIVRFQL 56
           M L S++ K+V+I+  L+ LFL  +VI    ++      ++Q+   +  +++L+++RF  
Sbjct: 1   MHLNSNR-KHVAIFALLSCLFLLASVITISALTKYFVDNEIQQE-EENLRKNLALIRFNF 58

Query: 57  EAEILGDIYTVKGLTTLLTLDPDLNIYQWEPLSAAVIRNSDHLRSLGIAPNDVVAFSYPL 116
           EA I  D Y    L T++T+DP+  +  W  ++A ++  + ++R++ IAPN+V++  YPL
Sbjct: 59  EATIYKDTYLADSLATVVTIDPEFAMKNWHVIAAKLLDKAQYVRNVAIAPNNVISLVYPL 118

Query: 117 PQTNALLGLDYRTVPQQWQSIKKAREIKQTFVSGPVDLVQGGRALVIREPIFYDPPKDTR 176
               A +G D+RT P Q +++  A+E +  +++GPV+LVQGG  L+ R PIF D PK+T+
Sbjct: 119 KGNEAAVGFDFRTQPNQLKTVLLAKEQQSVYIAGPVNLVQGGLGLIARYPIFADYPKNTQ 178

Query: 177 YWGVLSVVMDWDSLLSATSIYSFGEHFQVAIRGLDSRGSEGDVFFGEPRVFEHAFAQENV 236
           YWG +SVVM+++ LL  T I  F +   +AI+   +      VF+G+  +F++A     +
Sbjct: 179 YWGGVSVVMNYNQLLHDTGITQF-QGGDIAIKKQITANEPEQVFYGDASIFDNADVIYPI 237

Query: 237 YFPYGSWRIAVAEKQDLLQQLSWYTRNAVRLLGYSVLLVLMAGFGVIMRLYQVAEERALH 296
             P  +W +A     + L+++    R  +  +G      L     ++ R YQ     ALH
Sbjct: 238 KLPSATWNMAARFHIENLERIG-QLRLGIGGIGTIAAFTLYMLMLLLFRNYQHTHRAALH 296

Query: 297 DPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKVLVA 356
           D LTHLPNRR+ I  ++          ++  F LLNID++ FK +ND  GH AGD++L  
Sbjct: 297 DELTHLPNRRFIINELDRLMNKP----NQPPFTLLNIDLNDFKGVNDELGHEAGDELLKY 352

Query: 357 CAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDKLIH 416
            A R+ + + +   VAR GGDEFL+L+  +   Q++ ++  +I + I   P  +  + + 
Sbjct: 353 IANRLVTEVGIKGSVARFGGDEFLILLYELTDMQEIEEIMAHITQAIESQPFSWQSQQLT 412

Query: 417 VRVSIGYALYDQSFATPDEMFKLADERMYTAKR 449
             +SIGYA+YD   A   E+   AD+RMY  KR
Sbjct: 413 PSLSIGYAIYDGQNADIKELLSDADKRMYQQKR 445