Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 882 a.a., diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) from Shewanella loihica PV-4

 Score =  107 bits (268), Expect = 1e-27
 Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 3/156 (1%)

Query: 294 ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
           A HD LT LPNR  F+  +    ++ +R H+   FALL ID+DRFK IND+ GH  GD+ 
Sbjct: 450 ASHDTLTGLPNRAMFMERLAQAVKHVRR-HARDRFALLFIDLDRFKLINDTLGHLQGDRF 508

Query: 354 LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDK 413
           L+  A R+   +R +D + RIGGDEF++L+  I+   D ++V++ IL  +SE P    ++
Sbjct: 509 LIETARRLNLCIRSNDTLGRIGGDEFVILLDSINTNSDAIEVAERILGELSE-PYQLSNQ 567

Query: 414 LIHVRVSIGYALYDQSFA-TPDEMFKLADERMYTAK 448
                 SIG A    S   T + + K AD  MY AK
Sbjct: 568 SFTSGASIGIAFSGHSSGDTSESLLKDADAAMYQAK 603