Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1126 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  140 bits (353), Expect = 2e-37
 Identities = 87/251 (34%), Positives = 139/251 (55%), Gaps = 13/251 (5%)

Query: 42  RQQAKEDLSIVRFQLEAEILGDIYTVKGLTTLLTLDPDLNIYQWEPLSAAVIRNSDHLRS 101
           R QA  +L+ VR +LE +I+      +G+  LL  D  ++  ++  +++  I    H+R+
Sbjct: 52  RTQATAELAAVRARLEGQIMATFSITEGIVHLLRHDGSISPERFAGMASQAIAAVPHIRN 111

Query: 102 LGIAPNDVVAFSYPLPQTNALLGLDYRTVPQQWQSIKKAREIKQTFVSGPVDLVQGGRAL 161
           + +AP+DV+   YPL      LG  Y T P+Q+ ++++ARE+    ++GPVDLVQGGRAL
Sbjct: 112 IALAPDDVIRQVYPLAGNERALGFAYSTRPEQFATVRRARELGGPLLAGPVDLVQGGRAL 171

Query: 162 VIREPIFY-DPPKDTRYWGVLSVVMDWDSLLSATSIYSFGEHFQVAIRGLDSRGSEGDVF 220
           + R P+F  D    +RYWGV S+V D D LL+   I   G    +A+RG D  G++G + 
Sbjct: 172 IHRRPVFITDKAGGSRYWGVASIVADVDRLLNVGGIGREGP-LNLALRGRDGDGADGGMI 230

Query: 221 FGEPRVFEHAFAQENVYFPYGSWRIAVAEKQDLLQQLSWYTRNAVRLLGYSVLLVLMAGF 280
           +G+  VF       NV  P G+W++A       L +  W + N   LL   + LV ++  
Sbjct: 231 WGDSTVFGQQPVLMNVSVPGGTWQLAG------LPKAGWPSTN---LLHSPLFLVALS-- 279

Query: 281 GVIMRLYQVAE 291
             ++ LY VA+
Sbjct: 280 NTLLLLYFVAQ 290



 Score =  110 bits (274), Expect = 3e-28
 Identities = 66/167 (39%), Positives = 91/167 (54%), Gaps = 4/167 (2%)

Query: 292 ERALH-DPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAG 350
           ER  H DPLT LPNR  F   ++H  E A+R   E   A+L +D+D FK++NDS GH  G
Sbjct: 696 ERLAHFDPLTGLPNRTLFHDRLQHALERAQRYGQE--LAVLLLDLDGFKTVNDSLGHPTG 753

Query: 351 DKVLVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVY 410
           D +L   A R K  +RV D V+R+GGDEF +++  + +  D + V   +L+ + E P   
Sbjct: 754 DLLLQQAAHRFKECVRVEDTVSRLGGDEFAIILNNLAQGTDAISVVKKLLQALQE-PFDL 812

Query: 411 DDKLIHVRVSIGYALYDQSFATPDEMFKLADERMYTAKRRQNPLYRF 457
           D     V  SIG A+      TP+ + + AD  MY AK      YRF
Sbjct: 813 DGTAALVTTSIGIAIAPLDGDTPEALVRNADTAMYGAKEGGRNSYRF 859