Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 879 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (267), Expect = 2e-27
 Identities = 63/165 (38%), Positives = 95/165 (57%), Gaps = 4/165 (2%)

Query: 294 ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
           A  DPLTHLPNR   +  ++    +AKR +S+   A + ID+D FK INDS GHS GD++
Sbjct: 452 AYFDPLTHLPNRMKLMIQLKQEIMHAKRLNSQ--LATVFIDVDLFKHINDSFGHSIGDEM 509

Query: 354 LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETP-IVYDD 412
           LV  A+R++S L+  D+++RIG DEF+ LI  I   +D    + N L+++ E P +V   
Sbjct: 510 LVELAKRLRSQLQEQDVLSRIGSDEFVALISGIQYHEDA-TAAINQLRQVFEQPFVVSTG 568

Query: 413 KLIHVRVSIGYALYDQSFATPDEMFKLADERMYTAKRRQNPLYRF 457
             + +  ++G +LY    +  D + + AD  MY AK      Y F
Sbjct: 569 DHLRLTATMGVSLYPSDGSNADTLLRNADAAMYRAKSEGRNNYAF 613