Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  116 bits (290), Expect = 2e-30
 Identities = 62/160 (38%), Positives = 98/160 (61%), Gaps = 5/160 (3%)

Query: 291 EERALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGN-FALLNIDIDRFKSINDSHGHSA 349
           E+ AL+D LTHLPNR  F    + + +   RSH E + F+LL +D+D+FK +ND++GH  
Sbjct: 284 EQIALYDQLTHLPNRELFY---DRFQKALSRSHRESSYFSLLYLDLDKFKWVNDTYGHGV 340

Query: 350 GDKVLVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIV 409
           GD +L   A+R+   +R SD VAR GGDEF++L+ R+    + L V+  +L+ +++ P  
Sbjct: 341 GDLLLQITAQRLLGCVRASDTVARFGGDEFVILLERVDSAHNTLLVAHKVLEALNQ-PFE 399

Query: 410 YDDKLIHVRVSIGYALYDQSFATPDEMFKLADERMYTAKR 449
             ++ ++V  SIG ALY +      ++   AD  MY AK+
Sbjct: 400 LTEQQLYVFPSIGVALYPEHGKDEQQLLSCADAAMYKAKK 439