Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  115 bits (289), Expect = 8e-30
 Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 3/155 (1%)

Query: 294  ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
            A  D LT LPNR  F   + H    A RS++    ALL +D+DRFK INDS GH  GD +
Sbjct: 1082 ASFDTLTGLPNRTLFQDRLNHAISQAHRSNNI--VALLFLDLDRFKHINDSMGHHIGDLL 1139

Query: 354  LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDK 413
            L A A R++S++R  D VAR+GGDEF +++  + + +    +S+ +LK   + P + DDK
Sbjct: 1140 LKAVAHRLQSAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLKAF-QAPFLLDDK 1198

Query: 414  LIHVRVSIGYALYDQSFATPDEMFKLADERMYTAK 448
             +++  SIG +LY       D + K AD  MY AK
Sbjct: 1199 SLNISTSIGISLYPNDAKDVDSLIKFADTAMYHAK 1233